I'm wondering if something isn't connected right since your controller is sending power directly to your led string, it should be isolated by the driver.
But we can rule out the grounding first. Make sure everything is disconnected, then set your meter for continuity (so it beeps if you put the probes together). make sure one lead is attached very well to your heat sink, and then check every pad on your leds individually. If it beeps you've got a bad joint.